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Home » Recipes » Sourdough Recipes and Tips

Cranberry Cream Cheese Sourdough Muffins

Modified: Apr 4, 2025 · Published: Jan 5, 2025 by Erica Schramek · This post may contain affiliate links. · As an Amazon Associate I earn from qualifying purchases.

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These Cranberry Cream Cheese Sourdough Muffins are bursting with tart cranberries, feature a creamy cheese center, and are finished with a crunchy streusel topping.

They are great for breakfast, brunch or a snack especially during the winter holidays. I also have a Sourdough Cranberry Orange Muffin Recipe that you are sure to love.

A cranberry cream cheese muffin that has been cut in half on a white plate.

Muffins and other quick breads are so quick and easy to mix together. You don't even need a mixer.

Jump to:
  • Recipe Ingredients
  • Substitutions and Variations
  • Step by Step Directions
  • Frequently Asked Questions
  • Expert Tips
  • More Sourdough Discard Recipes
  • 📖 Recipe
  • Save This Recipe to Your Email
  • 💬 Comments

If you have a sourdough starter then you will probably also have an endless supply of sourdough discard. If makes a great addition to a variety of baked goods, such as these Sourdough Ham and Cheese Scones or this Sourdough Blueberry Scones.

Just like my Sourdough Apple Cinnamon Muffins, Sourdough Raspberry Muffins, Sourdough Orange Creamsicle, Sourdough Discard Chocolate Chip Muffins, Sourdough Gingerbread Muffins, and Sourdough Discard Lemon Poppy Seed Muffins, these muffins are a delicious breakfast option.

Recipe Ingredients

All you need are a few simple ingredients to make these Homemade Sourdough Cranberry Cream Cheese Muffins.

Sourdough cranberry cream cheese muffin ingredients on a white wood surface.
Streusel ingredients on a white wood surface.

All-Purpose Flour: No special flours are needed for these cookies. All-purpose flour is perfect. For accuracy, the best way to measure the flour is by using a digital kitchen scale.

Tip: If you don't have a digital scale, spoon the flour into the measuring cup and level it with the back of a butter knife. Try not to compress the flour into the measuring cup.

Corn Starch: Adding cornstarch to muffins reduces gluten formation and gives them a lighter softer texture.

Salt: I add at least a pinch of salt to all of my recipes. Salt complements and intensifies the other flavors. For all of my recipes, I use Morton Kosher Salt which packs more densely than Diamond Crystal Kosher Salt. If you are using Diamond Crystal Kosher Salt you will want to double the amount of salt you add.

Cranberries: Cranberry season is short. Fresh cranberries typically show up in stores in November and December. These muffins use a full bag of cranberries. If you can find fresh cranberries feel free to substitute frozen or dried cranberries otherwise known as crasins. If you are using frozen cranberries, there is no need to defrost them first.

Sourdough Discard: Don't worry your muffins won't be sour. This is plenty of sugar to eliminate the sourdough flavor. Bring your sourdough discard to room temperature before adding it to the recipe. It will be easier to incorporate. Active starter or sourdough discard can be used for this recipe.

Pro Sourdough Tip: Keep a glass jar in your refrigerator to store your sourdough discard. Continue adding to it until you have enough to make your chosen sourdough discard recipe.

Oil: Because oil remains a liquid at room temperature it helps to create a moist muffin. Use either canola or vegetable oil.

Buttermilk: Buttermilk reacts with baking soda to help the muffins rise. If you do not have buttermilk you can use regular milk and stir in one tablespoon of vinegar or lemon juice. Allow the mixture to sit for a few minutes until it curdles.

Cream Cheese: You will want to use block cream cheese not the whipped cream cheese that comes in a tub. I recommend using full-fat cream cheese for the creamiest texture. It needs to soften to room-temperature to make it easier to blend with the sugar.

See the recipe card for full information on ingredients and quantities.

Substitutions and Variations

Loaf Pans: Muffins and quickbreads are very similar and can often be baked in a loaf pan instead of a muffin pan.

  1. Pour the batter into the 2 greased 9x5 loaf pans and bake at 350°F for 60 to 65 minutes. The cranberry orange bread is done when a toothpick inserted into the center of the loaf comes out clean.
  2. Remove from the oven and allow the bread to cool in the pan for 15 minutes. Remove the bread from the pan and cool completely on a wire rack.

Jumbo or Mini Muffins:

  • For mini muffins, bake at 350°F for 11-13 minutes. Yields about 48 mini muffins.
  • For jumbo-size muffins baked at 425°F for 5 minutes and then lower the temperature to 350°F for 25-30 minutes. Yields about 12 jumbo muffins.

Cranberries: Cranberry season is short. Fresh cranberries typically show up in stores in November and December. If you can find fresh cranberries feel free to substitute frozen or dried cranberries otherwise known as crasins. If you are using frozen cranberries, there is no need to defrost them first.

You could also swap the cranberries for your favorite fruit try blueberries, strawberries, raspberries, or blackberries.

Sourdough Discard: If you don't have sourdough discard, you can easily substitute the same amount of sour cream, yogurt, or unsweetened applesauce.

Buttermilk: Buttermilk reacts with baking soda to help the muffins rise. If you do not have buttermilk you can use regular milk and stir in one tablespoon of vinegar or lemon juice. Allow the mixture to sit for a few minutes until it curdles.

Are you new to sourdough? I have plenty of information to help you on your sourdough journey.

  • How to Create Your Own Micro Sourdough Starter
  • Scrapings Method for Sourdough Starter
  • How to Dehydrate Sourdough Starter
  • Storing Sourdough Starter in the Refrigerator
  • Storing Sourdough Starter on the Counter
  • Best Containers for Storing Sourdough Starter and Discard
  • How Long Does Sourdough Discard Last?
  • What is the Difference Between Sourdough Starter and Sourdough Discard?
  • Best Gifts for Sourdough Bakers

Step by Step Directions

Cranberry Muffins

Bowl of flour and cut cranberries on a white cutting board.

Step 1: Move the oven rack to the middle position. Preheat the oven to 425°F (220°C). Grease two muffin pans with nonstick spray or line them with muffin papers. Set aside.

Step 2: In a large bowl, whisk together the all-purpose flour, cornstarch, baking powder, baking soda, and kosher salt until well combined. (Image 1)

Step 3: Chop the cranberries in half. (Image 2)

Tip: Smaller cranberry pieces are less likely to sink to the bottom of the muffins.

Bowl filled with cranberry muffin dry ingredients and a bowl filled with cranberry muffin wet ingredients.

Step 4: Add the chopped cranberries to the flour mixture. Toss them gently to coat. Coating the cranberries in flour will help keep them from sinking to the bottom of the muffins. (Image 3)

Step 5: In a separate bowl, add the granulated white sugar, sourdough discard, neutral oil, buttermilk, eggs, and vanilla. Whisk to combine. (Image 4)

Cranberry muffin batter divided into muffin cups.

Step 6: Pour the wet ingredients into the dry ingredients and stir until just combined. Be careful not to overmix; a few lumps are fine. (Image 5)

Tip: Do not overmix the batter. Overmixing can incorporate too much air causing the muffins to rise quickly and then fall in the center as they bake. Overmixing can also create tough muffins.

Step 7: Divide the muffin batter evenly among the muffin cups filling nearly to the top. (Image 6)

Tips: Use a cookie scoop to evenly portion the cupcake batter into the muffin pans.

Tips: For an additional pop of color add a few chopped cranberries to the top of the unbaked cupcakes.

Cream Cheese Filling

Cranberry muffins being topped with cream cheese.

Step 8: In a small bowl, add the cream cheese, granulated white sugar, vanilla extract, and kosher salt. Mix together until smooth. (Image 7)

Step 9: Use a spoon to make a well in the center of each muffin. Add about 2 teaspoons of the cream cheese filling to the center of each muffin. (Image 8)

Streusel Topping

Cranberry muffins being topped with streusel.

Step 10: In a small bowl, add the all-purpose flour, granulated white sugar, kosher salt, and unsalted butter. Use a fork to cut the butter into the other ingredients until the mixture is crumbly and the butter pieces are no larger than a pea. (Image 9)

Step 11: Sprinkle the streusel over each muffin. Bake the muffins in the preheated oven for 5 minutes, then, keeping the muffins in the oven, reduce the oven temperature to 350°F (180°C) and continue to bake for 13 to 16 minutes until the tops are golden brown. (Image 10)

Tip: Starting the muffins at a higher temperature will boost the rise giving you a taller muffin top.

Tip: Use a toothpick to test for doneness. Insert a toothpick into the center of a muffin, if it comes out clean, the muffins are done. For ways to check the muffin's doness read this post: How to Tell Banana Bread is Done.

Sourdough cranberry muffins on a wire rack.

Step 12: Allow the muffins to cool for several minutes in the muffin pan before transferring them to a wire rack to cool completely. (Image 11)

Frequently Asked Questions

Do you need muffin liners for baking muffins?

Muffins can be baked with or without liners. If baked with liners they will have a softer outside texture. Muffins baked without liners will be slightly crispier and darker on the outside.
I couldn't find jumbo muffin liners at my local store, so I bought these muffin liners from Amazon.

What is the best temperature for baking muffins?

To get a tall muffin, start baking your muffins at a higher temperature then after about five minutes lower the temperature.

I start my muffins at 425°F and then lower the temperature to 350°F. Starting at a higher temperature gives the baking soda and baking powder a nice boost of heat that encourages leavening.

It also allows the outside of the muffin to set quickly giving the inside the structure it needs to keep rising.

How do you store muffins?

These muffins will stay moist for a couple of days when stored at room temperature. Leftover muffins can be stored in an airtight container for 2-3 days.

For longer storage, keep them in the refrigerator for up to a week.

They can also be frozen for up to 3 months. Wrap each muffin in plastic wrap and place them in a zip-top bag. Thaw muffins at room temperature.

Should I use fresh or frozen cranberries in muffins?

The answer is either. If you can find fresh cranberries feel free to substitute frozen or dried cranberries otherwise known as crasins. If you are using frozen cranberries, there is no need to defrost them first.

You could also swap the cranberries for your favorite fruit try blueberries, strawberries, raspberries, or blackberries.

Can I make these muffins without the streusel topping?

Absolutely! You could also top these muffins with coarse sugar before baking them or make a glaze. This glaze that I use on these Sourdough Orange Creamsicle Muffins would be delicious.

Three cranberry cream cheese muffins on a white plate.

Expert Tips

  • Muffins bake best on the middle rack of the oven. Too low and the bottoms will burn, too high and the tops will brown too quickly.
  • If you are using frozen cranberries, there is no need to defrost them first.
  • Rinse and pick through the fresh or frozen cranberries, discarding any bad ones.
  • Make sure the cranberries are coated with the flour mixture before adding the wet ingredients. This will ensure they are evenly distributed throughout the batter and they won't sink to the bottom.
  • Don't over-mix the batter. A few lumps are fine. Overmixing will create too much gluten causing your muffins to be tough.
  • Use a cookie scoop to evenly portion the cupcake batter into the muffin pans.
  • Use a toothpick to test for doneness. Insert a toothpick into the center of a muffin, if it comes out clean, the muffins are done. For ways to check the muffin's doness read this post: How to Tell Banana Bread is Done.

More Sourdough Discard Recipes

  • Stack of oatmeal sourdough pancakes on a black plate topped with blueberries.
    Sourdough Oatmeal Pancakes with Sourdough Discard
  • Sourdough dutch baby topped with berries.
    Sourdough Discard Dutch Baby or German Pancake
  • Three slices of sourdough pumpkin bread on a white plate.
    Sourdough Pumpkin Bread with Cinnamon Sugar Topping
  • Close up of sourdough scones on a baking tray.
    Sourdough Scones with Sourdough Discard

Thanks for Reading!

If you try this recipe, let me know! Leave a comment and rate it below! You can also snap a picture and post it on Facebook or Instagram be sure to tag me @RaspberriesandKohlrabi.

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📖 Recipe

Three cranberry cream cheese muffins on a white plate.

Cranberry Cream Cheese Sourdough Muffins

Author: Erica Schramek
These Cranberry Cream Cheese Sourdough Muffins are bursting with tart cranberries, feature a creamy cheese center, and are finished with a crunchy streusel topping.
No ratings yet
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Prep Time 30 minutes mins
Cook Time 20 minutes mins
Total Time 50 minutes mins
Course Muffin Recipes
Cuisine American
Servings 24 Muffins
Calories 267 kcal
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Equipment

  • 2 muffin pan
  • muffin liners
  • microplane
  • mixing bowls
  • rubber spatula
  • kitchen scale

Ingredients
 
 

Cranberry Muffins

  • 2 ½ cups all-purpose flour
  • 2 tablespoons cornstarch
  • 1 tablespoon baking powder
  • ½ teaspoon baking soda
  • ½ teaspoon kosher salt
  • 3 cups cranberries fresh or frozen
  • 1 ½ cups granulated white sugar
  • 1 cup sourdough discard
  • ⅔ cup neutral oil canola or vegetable
  • ½ cup buttermilk room temperature
  • 3 large eggs room temperature
  • 1 tablespoon vanilla

Cream Cheese Filling

  • 8 oz cream cheese softened
  • ⅓ cup granulated white sugar
  • ½ teaspoon vanilla extract
  • ⅛ teaspoon kosher salt

Streusel Topping

  • ½ cup all-purpose flour
  • ½ cup granulated white sugar
  • ¼ teaspoon kosher salt
  • 4 tablespoons unsalted butter room temperature

Instructions
 

Cranberry Muffins

  • Move the oven rack to the middle position. Preheat the oven to 425°F (220°C). Grease two muffin pans with nonstick spray or line them with muffin papers. Set aside.
  • In a large bowl, whisk together the 2 ½ cups all-purpose flour, 2 tablespoons cornstarch, 1 tablespoon baking powder, ½ teaspoon baking soda, and ½ teaspoon kosher salt until well combined.
  • Chop the 3 cups cranberries in half. Smaller cranberry pieces are less likely to sink to the bottom of the muffins.
  • Add the chopped cranberries to the flour mixture. Toss them gently to coat. Coating the cranberries in flour will help keep them from sinking to the bottom of the muffins.
  • In a separate bowl, add the 1 ½ cups granulated white sugar, 1 cup sourdough discard, ⅔ cup neutral oil, ½ cup buttermilk, 3 large eggs, and 1 tablespoon vanilla. Whisk to combine.
  • Pour the wet ingredients into the dry ingredients and stir until just combined. Be careful not to overmix; a few lumps are fine.
  • Divide the muffin batter evenly among the muffin cups filling nearly to the top.

Cream Cheese Filling

  • In a small bowl, add the 8 oz cream cheese, ⅓ cup granulated white sugar, ½ teaspoon vanilla extract, and ⅛ teaspoon kosher salt. Mix together until smooth.
  • Use a spoon to make a well in the center of each muffin. Add about 2 teaspoons of the cream cheese filling to the center of each muffin.

Streusel Topping

  • In a small bowl, add the ½ cup all-purpose flour, ½ cup granulated white sugar, ¼ teaspoon kosher salt, and 4 tablespoons unsalted butter. Use a fork to cut the butter into the other ingredients until the mixture is crumbly and the butter pieces are no larger than a pea.
  • Sprinkle the streusel over each muffin.
  • Bake the muffins in the preheated oven for 5 minutes, then, keeping the muffins in the oven, reduce the oven temperature to 350°F (180°C) and continue to bake for 13 to 16 minutes until the tops are golden brown.
  • Allow the muffins to cool for several minutes in the muffin pan before transferring them to a wire rack to cool completely.

Notes

Storage: These muffins will stay moist for a couple of days when stored at room temperature. Leftover muffins can be stored in an airtight container for 2-3 days.
For longer storage keep them in the refrigerator for up to a week.
They can also be frozen for up to 3 months. Wrap each muffin in plastic wrap and place them in a zip-top bag. Thaw muffins at room temperature.
Tips
    • Muffins bake best on the middle rack of the oven. Too low and the bottoms will burn, too high and the tops will brown too quickly.
    • If you are using frozen cranberries, there is no need to defrost them first.
    • Rinse and pick through the fresh or frozen cranberries, discarding any bad ones.
    • Make sure the cranberries are coated with the flour mixture before adding the wet ingredients. This will ensure they are evenly distributed throughout the batter and they won't sink to the bottom.
    • Don't over-mix the batter. A few lumps are fine. Overmixing will create too much gluten causing your muffins to be tough.
    • Use a cookie scoop to evenly portion the cupcake batter into the muffin pans.
    • Use a toothpick to test for doneness. Insert a toothpick into the center of a muffin, if it comes out clean, the muffins are done. 

Nutrition

Serving: 1Calories: 267kcalCarbohydrates: 36gProtein: 3gFat: 12gSaturated Fat: 4gPolyunsaturated Fat: 2gMonounsaturated Fat: 6gTrans Fat: 0.1gCholesterol: 36mgSodium: 205mgPotassium: 56mgFiber: 1gSugar: 21gVitamin A: 231IUVitamin C: 2mgCalcium: 52mgIron: 1mg
Have you tried this recipe?Mention @raspberriesandkohlrabi or tag #raspberriesandkohlrabi!

More Easy Sourdough Recipes and Tips for Beginners

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    Sourdough Discard Sheet Pan Pancakes (Easy Oven-Baked Recipe)
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I am a self-taught cook and the writer, recipe developer, food stylist, and photographer behind this blog.

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